Frequently Asked Questions

• What is TANRIC?

  TANRIC is an open-access resource for interactive exploration of lncRNAs in cancer. It characterizes the expression profiles of lncRNAs in large patient cohorts of 20 cancer types including TCGA, CCLE and other independent datasets.

• How are long noncoding-RNA expression quantified?

  Based on the BAM files, we use RPKM to quantify the expression levels of lncRNAs. Please refer to the pipeline shown in quick tutorial.

• What datasets are currently included in TANRIC?

  The current data release consists of three data sources: (i) TCGA (20 cancer types); (ii) OTHER (including three independent datasets); and (iii) CCLE (20 cancer lineages).

• Any restrictions on use of data obtained from TANRIC?

  All data available on TANRIC website is free to use for educational and research purposes.
  For other purposes, please contact Dr. Han Liang.

• What modules are in TANRIC?

  Currently we have 6 modules available: (i) Summary; (ii) Visualization; (iii) Download; (iv) My lncRNA; (v) Analyze all lncRNAs and (vi) LncRNAs in cell lines.

• How can I quickly learn about using TANRIC?

  Please view the quick tutorial here, which includes videos on how to use each module in TANRIC.

• What browsers does TANRIC currently support?

  We recommend use of HTML5-compliant browsers such as Safari, Chrome, and Firefox.

• Does TANRIC require login?

  No, login is not required – the website is open access.

• Who should I contact if I have other questions about TANRIC?

  Please contact Dr. Han Liang (hliang1@mdanderson.org) if you have any questions or find any bugs at TANRIC website.